BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029C07SP1|AL429036
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1313 1723 0.0
>3x_Contig1313
Length = 8010
Score = 1723 bits (869), Expect = 0.0
Identities = 872/873 (99%)
Strand = Plus / Plus
Query: 1 gttaaggaaaaagtagatatcagacctggattacaggagctgatgcagcagtataacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3263 gttaaggaaaaagtagatatcagacctggattacaggagctgatgcagcagtataacaag 3322
Query: 61 acgtacgtgctttcgttgaactggtccaaggacctcatacacgacctaacgggtatttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3323 acgtacgtgctttcgttgaactggtccaaggacctcatacacgacctaacgggtatttcc 3382
Query: 121 aaatcggatatctactgtaacgaattaaaatcacgtgatggggaagtttacagcggacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3383 aaatcggatatctactgtaacgaattaaaatcacgtgatggggaagtttacagcggacaa 3442
Query: 181 tttacaaagcaaatattgaccggttgggacaagtacgagatgttgaaagagatttgcgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3443 tttacaaagcaaatattgaccggttgggacaagtacgagatgttgaaagagatttgcgat 3502
Query: 241 ttagacaaagtgcaaggggaccagagcataacttatattggagatagttttggcgatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3503 ttagacaaagtgcaaggggaccagagcataacttatattggagatagttttggcgatttg 3562
Query: 301 ccttgtattctggcaaaagaagtagatggatacattattggcgatcgcttgaagcatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3563 ccttgtattctggcaaaagaagtagatggatacattattggcgatcgcttgaagcatttg 3622
Query: 361 gatatagatgttcctactattcaaaggttcgatgaggtaaaatgttaaacggtcataagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3623 gatatagatgttcctactattcaaaggttcgatgaggtaaaatgttaaacggtcataagt 3682
Query: 421 tccttgtactaccgaatgaagatactagtaggcgtcggtacatgcgtactttgatcgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3683 tccttgtactaccgaatgaagatactagtaggcgtcggtacatgcgtactttgatcgata 3742
Query: 481 aaaatggtggtcaacatggggtagagattggtttgattgatgatagttttgtccatggtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3743 aaaatggtggtcaacatggggtagagattggtttgattgatgatagttttgtccatggtg 3802
Query: 541 accatattattaatcacaagttgttctataaggaaatgaatccgaacgatgttcccttag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3803 accatattattaatcacaagttgttctataaggaaatgaatccgaacgatgttcccttag 3862
Query: 601 atcaattgcgtctattcaaactttctgatttgaccaaatggttgaaacataggttcttgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 atcaattgcgtctattcaaactttctgatttgaccaaatggttgaaacataggttcttgg 3922
Query: 661 atttctcgaaacctttgaagttgcatgaggaagttgtagtggagacggactcgcaagagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3923 atttctcgaaacctttgaagttgcatgaggaagttgtagtggagacggactcgcaagagt 3982
Query: 721 caaatactggtgtcccggatacgcaccaagttaccagtccgagcgaaacccatgacacag 780
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 ccaatactggtgtcccggatacgcaccaagttaccagtccgagcgaaacccatgacacag 4042
Query: 781 cggatacaaatgtcagtcactcttctgatgcgaatctaataatgcctatgaataatccga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4043 cggatacaaatgtcagtcactcttctgatgcgaatctaataatgcctatgaataatccga 4102
Query: 841 attacaaacttataaaggtgctcaaaagtttag 873
|||||||||||||||||||||||||||||||||
Sbjct: 4103 attacaaacttataaaggtgctcaaaagtttag 4135
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5831
Number of Sequences: 1807
Number of extensions: 5831
Number of successful extensions: 33
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)